Exploring the conformational effects of N- and C-methylation of N-acylhydrazones
N-Acylhydrazones (NAH) are privileged structures in chemistry and medicinal chemistry. In this study, we describe the conformational effects of N- and C-methylated N-acylhydrazone derivatives, combining theoretical and experimental data analysis. Four N-acylhydrazone (NAH) derivatives (4–7) were synthesized and structurally characterized to investigate the impact of methylation on their conformational preferences and electronic properties. The structural characterization by NMR spectroscopy, including 2D techniques (HSQC, HMBC, and NOESY), confirmed the exclusive formation of (E)-diastereomers. Theoretical conformational analysis using density functional theory (DFT) calculations (CAM-B3LYP/6-31+G(d,p) with the C-PCM solvation model) revealed that N-methylation (6) significantly alters the preferred dihedral angle (O=C–N–X), inducing a shift from an antiperiplanar to a synperiplanar conformation. Notably, compound 7 showed two possible conformers in solution, anti and syn at the amide bond, and exhibited a greater deviation from planarity due to steric effects imposed by the two methyl groups, which disrupt conjugation within the NAH moiety. This was further supported by natural bond orbital (NBO) analysis, which demonstrated changes in electron density distribution, particularly at the carbonyl and imine carbons, correlating well with the calculated and experimental 13C NMR chemical shifts. Noncovalent interaction (NCI) analysis and powder X-ray diffraction provided additional evidence for these conformational trends, reinforcing the influence of methylation on NAH planarity. The findings highlight the steric and electronic consequences of methylation on NAH derivatives, which may have implications for their biological activity and molecular recognition properties.
Funding
Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - Brasil (CAPES) - Finance Code 001
INCT-INOFAR (BR, grant numbers 465.249/2014-0 and CNPq 115866/2023-0)
Fundação Carlos Chagas Filho de Amparo à Pesquisa do Estado do Rio de Janeiro (FAPERJ grant numbers E-26/010.001273/2016 and SEI-260003/003613/2022; FAPERJ grant numbers E-26/210.718/2024 and SEI-260003/006052/2024)
Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq, grant number 304.811/2022-0)
Departamento de Ciência e Tecnologia, Ministério da Saúde (DECIT-MS)
Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP) (grant number 2023/01502-1)
History
Data Availability Statement
The data supporting this article have been included as part of the Supporting Information. Crystallographic data for com-pounds 4 and 6 has been deposited at the CCDC under the IDs 1908136 and 1908137, respectively.Comments
The original article is available at https://pubs.acs.org/Published Citation
Franco LS, et al. Exploring the conformational effects of N- and C-methylation of N-acylhydrazones. ACS Omega. 2025;10(17):17993-18004.Publication Date
21 April 2025External DOI
PubMed ID
40352515Department/Unit
- School of Pharmacy and Biomolecular Sciences
Publisher
American Chemical SocietyVersion
- Published Version (Version of Record)